T2 Publications

YEAR 7

(* Indicates Associated Project)

Vishwesh Shah, Xilin Yang, Alyssa Arnheim, Shreya Udani, Derek Tseng, Yi Luo, Mengxing Ouyang, Ghulam Destgeer, Omai B. Garner, Hatice C. Koydemir, Aydogan Ozcan*, and Dino Di Carlo*. “Amphiphilic Particle-Stabilized Nanoliter Droplet Reactors with a Multimodal Portable Reader for Distributive Biomarker Quantification“
Xu, Weiming, Althumayri, Majed, Mohammad, Amin, Koydemir, Hatice Ceylan. “Foldable low-cost point-of-care device for testing blood coagulation using smartphones.”
*Xu, Weiming, Venkat, Esha, Koydemir, Hatice Ceylan. “Optical point of care devices for diagnosis of urinary tract infections.”
*Astratov, Vasily N., Sahel, Yair Ben, Eldar, Yonina C., Huang, Luzhe, Ozcan, Aydogan, et al. “Roadmap on Label-Free Super-Resolution Imaging.”
*Park, Juyeon, Bai, Bijie, Ryu, DongHun, Liu, Tairan, Lee, Chungha, Luo, Yi, Lee, Mahn Jae, Huang, Luzhe, Shin, Jeongwon, Zhang, Yijie, Ryu, Dongmin, Li, Yuzhu, Kim, Geon, Min, Hyun-seok, Ozcan, Aydogan, Park, YongKeun. “Artificial intelligence-enabled quantitative phase imaging methods for life sciences.”
Xu, Weiming, Althumayri, Majed, Ceylan Koydemir, Hatice. “Point of care testing of blood coagulation using a smartphone (Invited Talk)”
Xu, Weiming, Althumayri, Majed, Mohommad, Amin, Ceylan Koydemir, Hatice. “Low-cost, foldable smartphone-based point of care device for blood coagulation testing.”

YEAR 6

(* Indicates Associated Project)

Makela, Megan, Zhihai Lin, and Pao Tai Lin. “Rapid Detection of SARS-CoV-2 Genetic Targets Using Nanoporous Waveguide Based Competitive Displacement Assay.” Giant (2023): 100173.
Leonard, Jamie, Hatice Ceylan Koydemir, Vera S. Koutnik, Derek Tseng, Aydogan Ozcan, and Sanjay K. Mohanty. “Smartphone-enabled rapid quantification of microplastics.” Journal of Hazardous Materials Letters 3 (2022): 100052.
*Budd, Jobie, Benjamin S. Miller, Nicole E. Weckman, Dounia Cherkaoui, Da Huang, Alyssa Thomas Decruz, Noah Fongwen et al. “Lateral flow test engineering and lessons learned from COVID-19.” Nature Reviews Bioengineering 1, no. 1 (2023): 13-31.
Soliman, Cyril, Jonathan Faircloth, Dandan Tu, Samuel Mabbott, Kristen Maitland, and Gerard Coté. “Exploring the Clinical Utility of Raman Spectroscopy for Point-of-Care Cardiovascular Disease Biomarker Detection.” Applied Spectroscopy 77, no. 10 (2023): 1181-1193.
Goncharov, Artem, Hyou‐Arm Joung, Rajesh Ghosh, Gyeo‐Re Han, Zachary S. Ballard, Quinn Maloney, Alexandra Bell et al. “Deep Learning‐Enabled Multiplexed Point‐of‐Care Sensor using a Paper‐Based Fluorescence Vertical Flow Assay.” Small (2023): 2300617.
Goncharov, Artem, Hyou‐Arm Joung, Ballard, Zachary S., Di Carlo, Dino, Garner, Omia, Ozcan, Aydogan, “Computational sensing with a multiplexed paper-based vertical flow assay for point-of-care applications” SPIE Translational Biophotonics & Additive Manufacturing Los Angeles, CA, USA Sep 12-14, 2022
Astratov, Vasily N., Sahel, Yair Ben, Eldar, Yonina C., Luzhe, Ozcan, Aydogan et al., “Roadmap on Label-Free Super-Resolution Imaging.“ Laser Photonics Rev 2023, 17, 2200029. https://doi.org/10.1002/lpor.202200029
Chen H, Huang L, Liu T, Ozcan A. “A broadly generalizable deep neural network for rapid phase recovery and hologram reconstruction.“ InFrontiers in Optics 2022 Oct 17 (pp. FM5C-2). Optica Publishing Group.
Chen H, Huang L, Liu T, Ozcan A. “eFIN: enhanced Fourier imager network for generalizable autofocusing and pixel super-resolution in holographic imaging.“ IEEE Journal of Selected Topics in Quantum Electronics. 2023 Feb 24;29(4: Biophotonics):1-0.
Chen H, Huang L, Liu T, Ozcan A. “Deep learning-based hologram reconstruction with superior external generalization (Conference Presentation).“ InQuantitative Phase Imaging IX 2023 Mar 16 (p. PC123890P). SPIE.
Chen H, Huang L, Liu T, Ozcan A. “Deep Learning-enabled Autofocusing and Pixel Super-Resolution in Holographic Imaging.“ InFrontiers in Optics 2023 Oct 9 (pp. FTu6D-2). Optica Publishing Group.
*Ghosh R, Joung HA, Goncharov A, Palanisamy B, Ngo K, Pejcinovic K, Krockenberger N, Horn EJ, Garner OB, Ghazal E, O’Kula A. “Single-tier point-of-care serodiagnosis of Lyme disease.“ bioRxiv. 2023 Jun 14.
Goncharov A, Joung HA, Ghosh R, Han GR, Ballard ZS, Maloney Q, Bell A, Aung CT, Garner OB, Di Carlo D, Ozcan A. “Fluorescence-based multiplexed point-of-care sensor using deep learning.“ InBio-Optics: Design and Application 2023 Apr 24 (pp. DTu3A-7). Optica Publishing Group.
Huang L, Chen H, Liu T, Ozcan A. “Self-supervised learning of hologram reconstruction using physics consistency“ Nature Machine Intelligence. 2023 Aug;5(8):895-907.
Huang L, Yang X, Liu T, Ozcan A. “Few-shot transfer learning of a recurrent neural network (RNN) for holographic image reconstruction.“ InFrontiers in Optics 2022 Oct 17 (pp. FTh3B-3). Optica Publishing Group.
Huang L, Yang X, Liu T, Ozcan A. “Few-shot transfer learning using a recurrent neural network for hologram reconstruction (Conference Presentation).“ InQuantitative Phase Imaging IX 2023 Mar 16 (p. PC123890B). SPIE.
*Joung HA, Ghosh R, Goncharov A, Ngo K, Palanisamy B, Horn EJ, Arnaboldi PM, Dattwyler RJ, Garner OB, Di Carlo D, Ozcan A. “Computational optical sensor with a paper-based peptide panel assay for point-of-care testing of Lyme disease.“ InCLEO: Applications and Technology 2023 May 7 (pp. AW3Q-1). Optica Publishing Group.
*Joung HA, Ghosh R, Goncharov A, Palanisamy B, Ngo K, Pejcinovic K, Krockenberger N, Horn EJ, Dattwyler RJ, Arnaboldi PM, Garner O. “Deep-learning enabled point-of-care sensor for Lyme disease diagnosis.“ InEmerging Topics in Artificial Intelligence (ETAI) 2023 2023 Sep 28 (p. PC1265505). SPIE.
Huang L, Chen H, Liu T, Ozcan A. “Self-supervised neural network for holographic microscopy.” InCLEO: Applications and Technology 2023 May 7 (pp. ATu3Q-4). Optica Publishing Group.
Ozcan A. “Deep learning-enabled computational microscopy and diffractive imaging.“ InBiomedical Imaging and Sensing Conference 2023 Sep 20 (Vol. 12608, pp. 177-178). SPIE.
Shah V, Yang X, Arnheim A, Udani S, Tseng D, Luo Y, Ouyang M, Destgeer G, Garner OB, Koydemir HC, Ozcan A. “Amphiphilic Particle-Stabilized Nanoliter Droplet Reactors with a Multimodal Portable Reader for Distributive Biomarker Quantification.“ ACS nano. 2023 Oct 12;17(20):19952-60.
Xu W, Althumayri M, Mohammad A, Koydemir HC. “Foldable low-cost point-of-care device for testing blood coagulation using smartphones.“ Biosensors and Bioelectronics. 2023 Dec 15;242:115755.
*Xu W, Venkat E, Koydemir HC. “Optical Point of Care Devices for Diagnosis of Urinary Tract Infections.“ Current Opinion in Biomedical Engineering. 2023 Nov 8:100513.

YEAR 5

(* Indicates Associated Project)

*Berglund G, Wisniowiecki A, Gawedzinski J, Applegate B, Tkaczyk TS. “Additive manufacturing for the development of optical/photonic systems and components.” Optica. 2022 Jun 20;9(6):623-38.
*Yang J, Caruso A, Li J, Lin PT. “Mid-Infrared Spectrum Sensing Algorithm Applying Micro-Resonator Arrays.“ IEEE Sensors Journal. 2022 Mar 30;22(13):13387-94.
*Lin Z, Caruso A, Makela M, Lin PT. “Real-Time Acetone Vapor Detection Using Mid-Infrared Nanoporous Membrane.“ IEEE Sensors Journal. 2022 Jun 6;22(14):14038-43.
*Benjamin S. Miller, Michael R. Thomas, Matthew Banner, Jeongyun Kim, Yiyun Chen, Qingshan Wei, Derek K. Tseng, Zoltán S. Göröcs, Aydogan Ozcan, Molly M. Stevens, Rachel A. McKendry, “Sub-picomolar lateral flow antigen detection with two-wavelength imaging of composite nanoparticles, Biosensors and Bioelectronics“, Volume 207, 2022, 114133, ISSN 0956-5663, https://doi.org/10.1016/j.bios.2022.114133.

YEAR 4

Trofymchuk, Kateryna, Viktorija Glembockyte, Lennart Grabenhorst, Florian Steiner, Carolin Vietz, Cindy Close, Martina Pfeiffer, et al. 2021. “Addressable Nanoantennas with Cleared Hotspots for Single-Molecule Detection on a Portable Smartphone Microscope.” Nature Communications 12 (1): 950.
Haan, Kevin de, Hatice Ceylan Koydemir, Yair Rivenson, Derek Tseng, Elizabeth Van Dyne, Lissette Bakic, Doruk Karinca, et al. 2020. “Automated Screening of Sickle Cells Using a Smartphone-Based Microscope and Deep Learning.” Npj Digital Medicine 3 (1).
Huang, Luzhe, Yilin Luo, Yair Rivenson, and Aydogan Ozcan. 2021. “Deep Learning-Based Single-Shot Autofocusing of Microscopy Images.” In Proc.SPIE. Vol. 11647.
Goncharov, Artem, Calvin Brown, Zachary Ballard, Mason Fordham, Ashley Clemens, Yunzhe Qiu, Yair Rivenson, and Aydogan Ozcan. 2021. “Deep Learning-Based Spectral Reconstruction on a Chip Using a Scalable Plasmonic Encoder” In Conference on Lasers and Electro-Optics, FTh1K.4. Optical Society of America.
Goncharov, Artem, Calvin Brown, Zachary Ballard, Mason Fordham, Ashley Clemens, Yunzhe Qui, Yair Rivenson, and Aydogan Ozcan. 2021. “Deep-Learning-Based Compact Spectrum Analyzer on a Chip.” In Proc.SPIE. Vol. 11703.
Yang, Xilin, Luzhe Huang, Yilin Luo, Yichen Wu, Hongda Wang, Yair Rivenson, and Aydogan Ozcan. 2021. “Deep-Learning-Based Virtual Refocusing of Images Using an Engineered Point-Spread Function.” ACS Photonics 8 (7): 2174–82.
Huang, Luzhe, Tairan Liu, Xilin Yang, Yi Luo, Yair Rivenson, and Aydogan Ozcan. 2021. “Holographic Image Reconstruction with Phase Recovery and Autofocusing Using Recurrent Neural Networks.” ACS Photonics 8 (6): 1763–74.
Wetzstein, Gordon, Aydogan Ozcan, Sylvain Gigan, Shanhui Fan, Dirk Englund, Marin Soljačić, Cornelia Denz, David A B Miller, and Demetri Psaltis. 2020. “Inference in Artificial Intelligence with Deep Optics and Photonics.” Nature 588 (7836): 39–47.
Ballard, Zachary, Calvin Brown, Asad M Madni, and Aydogan Ozcan. 2021. “Machine Learning and Computation-Enabled Intelligent Sensor Design.” Nature Machine Intelligence 3 (7): 556–65. .
Zhou, Junchao, Mingzhao Liu, Ming Lu, and Pao Tai Lin. 2020. “Mid-Infrared Frequency Doubling Using Strip-Loaded Silicon Nitride on Epitaxial Barium Titanate Thin Film Waveguides.” Optics Letters 45 (23): 6358–61. .
Brown, Calvin, Artem Goncharov, Zachary S Ballard, Mason Fordham, Ashley Clemens, Yunzhe Qiu, Yair Rivenson, and Aydogan Ozcan. 2021. “Neural Network-Based On-Chip Spectroscopy Using a Scalable Plasmonic Encoder.” ACS Nano 15 (4): 6305–15.
Branan, K., and Coté, G.L. 2021. “Optoelectronic Wearable Devices for Cardiac Applications.” In Stored Ion and Bio Optical Research Group (SIBOR) Workshop. Montgomery, Texas.
Luo, Yi, Hyou-Arm Joung, Sarah Esparza, Jingyou Rao, Omai Garner, and Aydogan Ozcan. 2021. “Quantitative Particle Agglutination Assay for Point-of-Care Testing Using Mobile Holographic Imaging and Deep Learning.” Lab Chip 21 (18): 3550–58.
Huang, Luzhe, Hanlong Chen, Yilin Luo, Yair Rivenson, and Aydogan Ozcan. 2021. “Recurrent Neural Network-Based Volumetric Fluorescence Microscopy.” Light: Science & Applications 10 (1): 62.
Haan, Kevin De, Hatice Ceylan Koydemir, Yair Rivenson, Derek Tseng, Elizabeth Van Dyne, Lissette Bakic, Doruk Karinca, et al. 2021. “Screening of Sickle Cell Disease Using a Smartphone-Based Microscope and Deep-Learning.” In Optics and Biophotonics in Low-Resource Settings VII, edited by David Levitz and Aydogan Ozcan. Vol. 11632. SPIE.
Luo, Yilin, Luzhe Huang, Yair Rivenson, and Aydogan Ozcan. 2021. “Single-Shot Autofocusing of Microscopy Images Using Deep Learning.” ACS Photonics 8 (2): 625–38.
Xilin, Yang, Luzhe Huang, Yilin Luo, Yichen Wu, Hongda Wang, Yair Rivenson, and Aydogan Ozcan. 2021. “Virtual Refocusing of Fluorescence Images Using an Engineered Point-Spread Function and Deep Learning.” In Proc.SPIE. Vol. 11804.

YEAR 3

Haan, Kevin de, Hatice Ceylan Koydemir, Yair Rivenson, Derek Tseng, Elizabeth Van Dyne, Lissette Bakic, Doruk Karinca, et al. 2020. “Automated Screening of Sickle Cells Using a Smartphone- Based Microscope and Deep Learning.” In Conference on Lasers and Electro-Optics, AW3T.5. OSA Technical Digest. Washington, DC: Optical Society of America.
Brown, Calvin, Derek Tseng, Paige M K Larkin, Susan Realegeno, Leanne Mortimer, Arjun Subramonian, Dino Di Carlo, Omai B Garner, and Aydogan Ozcan. 2020. “Automated, Cost-Effective Optical System for Accelerated Antimicrobial Susceptibility Testing (AST) Using Deep Learning.” ACS Photonics 7 (9): 2527–38.
Makela, Megan, Paul Gordon, Dandan Tu, Cyril Soliman, Gerard L Coté, Kristen Maitland, and Pao Tai Lin. 2020. “Benzene Derivatives Analysis Using Aluminum Nitride Waveguide Raman Sensors.” Analytical Chemistry 92 (13): 8917–22.
Zhou, Junchao, Wenrui Zhang, Mingzhao Liu, and Pao Tai Lin. 2019. “Broadband Mid-Infrared Second Harmonic Generation Using Epitaxial Polydomain Barium Titanate Thin Films.” Photonics Research 7 (10): 1193–99.
Ballard, Zachary S, Hyou-Arm Joung, Artem Goncharov, Jesse Liang, Karina Nugroho, Dino Di Carlo, Omai B Garner, and Aydogan Ozcan. 2020. “Computational Sensing with a Multiplexed Vertical Flow Assay for High-Sensitivity C-Reactive Protein Quantification.” In Conference on Lasers and Electro-Optics, AM3I.7. OSA Technical Digest. Washington, DC: Optical Society of America.
Haan, Kevin De, Yair Rivenson, Yichen Wu, and Aydogan Ozcan. 2020. “Deep-Learning-Based Image Reconstruction and Enhancement in Optical Microscopy.” Proceedings of the IEEE 108 (1): 30–50.
Lin, Pao T, Gerard Cote, Kristen Maitland, Tiening Jin, Junchao Zhou, Paul Gordon, and Cyril Soliman. 2019. “Optical Waveguides for On-Chip Fluorescence Measurements (Conference Presentation).” In Proc.SPIE. Vol. 10885.
Ghaderinezhad, Fariba, Hatice Ceylan Koydemir, Derek Tseng, Doruk Karinca, Kyle Liang, Aydogan Ozcan, and Savas Tasoglu. 2020. “Sensing of Electrolytes in Urine Using a Miniaturized Paper-Based Device.” Scientific Reports 10 (1): 1–9.
Ceylan Koydemir, Hatice, Simran Rajpal, Esin Gumustekin, Doruk Karinca, Kyle Liang, Zoltan Göröcs, Derek Tseng, and Aydogan Ozcan. 2019. “Smartphone-Based Turbidity Reader.” Scientific Reports 9 (1): 1–11.
Haan, Kevin de, Hatice Ceylan Koydemir, Yair Rivenson, Derek Tseng, Elizabeth Van Dyne, Lissette Bakic, Doruk Karinca, et al. 2020. “Automated Screening of Sickle Cells Using a Smartphone-Based Microscope and Deep Learning.” Npj Digital Medicine 3 (1): 76

YEAR 2

Ibrahim, B, D A Hall, and R Jafari. 2019. “Bio-Impedance Simulation Platform Using 3D Time-Varying Impedance Grid for Arterial Pulse Wave Modeling.” In 2019 IEEE Biomedical Circuits and Systems Conference (BioCAS), 1–4.
Zhou, Junchao, Wenrui Zhang, Mingzhao Liu, and Pao Tai Lin. 2019. “Broadband Mid-Infrared Second Harmonic Generation Using Epitaxial Polydomain Barium Titanate Thin Films.” Photonics Research 7 (10): 1193–99.
Rivenson, Y, Hatice Ceylan Koydemir, Wang H, Zhensong Wei, Zhengshuang Ren, and Y Gunaydin. 2018. “Deep Learning Bridges The Gap Between Mobile And Laboratory Grade Microscopes.” In BMES National Meeting. Atlanta Georgia.
Wang, H, Y Rivenson, Y Jin, Z Wei, R Gao, H Günaydın, L A Bentolila, C Kural, and A Ozcan. 2019. “Deep Learning Enables Cross-Modality Super-Resolution in Fluorescence Microscopy.” Nat. Methods 16 (1): 103.
Rivenson, Yair, Hatice Ceylan Koydemir, Hongda Wang, Zhensong Wei, Zhengshuang Ren, Harun Günaydln, Yibo Zhang, et al. 2018. “Deep Learning Enhanced Mobile-Phone Microscopy.” ACS Photonics 5 (6): 2354–64.
Rivenson, Yair, Hatice Koydemir, Hongda Wang, Zhensong Wei, Zhengshuang Ren, Harun Gunaydin, Yibo Zhang, et al. 2017. “Deep Learning Enhanced Mobile-Phone Microscopy.” ACS Photonics 5 (December).
Ozcan, Aydogan. “Deep Learning in Optical Microscopy and Image Reconstruction.” In SPIE Defense & Commerical Sensing (DCS) Conference. Baltimore, MD, USA.
Ozcan, Aydogan. “Deep Learning in Optical Microscopy and Image Reconstruction.” In OSa Conference on Lasers and Electro-Optics (CLEO). San Jose, California.
Ozcan, Aydogan. 2019. “Deep Learning Optics.” In SPIE Photonics West,. San Francisco, CA.
Ballard, Zachary S., and A. Ozcan. n.d. “Deep Learning-Enabled Computational Microscopy and Sensing.” In SPIE Photonics West, Optics and Biophotonics. San Diego, CA.
Ozcan, Aydogan. 2019. “Deep Learning-Enabled Computational Microscopy and Sensing (Conference Presentation).” In Proc.SPIE. Vol. 11087.
Haan, Kevin De, Yair Rivenson, Yichen Wu, and Aydogan Ozcan. 2020. “Deep-Learning-Based Image Reconstruction and Enhancement in Optical Microscopy.” Proceedings of the IEEE 108 (1): 30–50.
Zhou, Junchao, and Pao Tai Lin. 2019. “Efficient Mid-Infrared Vortex Beam Generation Using Optical Waveguides Integrated with Micro-Spiral Phase Plates.” Journal of Optics 21 (10): 105801.
Berglund, Gregory D, and Tomasz S Tkaczyk. 2019. “Fabrication of Optical Components Using a Consumer-Grade Lithographic Printer.” Optics Express 27 (21): 30405–20.
Jin, Tiening, Hao-Yu Greg Lin, Tom Tiwald, and Pao Tai Lin. 2019. “Flexible Mid-Infrared Photonic Circuits for Real-Time and Label-Free Hydroxyl Compound Detection.” Scientific Reports 9 (1): 4153.
Ballard, Zachary S., Ashley Clemens, F Haque, M Lucero, Shyama Sathianathan, Daniel Shir, and Aydogan Ozcan. “Flexible Plasmonic Sensors for Wearables and One-Time Use Assays.” In SPIE Photonics West, Optics and Biophotonics in Low-Resource Settings V. San Francisco, CA.
Berglund, Gregory D, and Tomasz S Tkaczyk. n.d. “Novel Optical Systems, Methods, and Applications XXII Fabrication of Optical Elements Using a Consumer Grade 3D Lithographic Printer.” In SPIE Annual Meeting. San Diego, CA.
Chue-Sang, Joseph, Mariacarla Gonzalez, Angie Pierre, Megan Laughrey, Ilyas Saytashev, Tatiana Novikova, and Jessica C Ramella-Roman. 2019. “Optical Phantoms for Biomedical Polarimetry: A Review.” Journal of Biomedical Optics 24 (3): 1–12.
Lin, Pao T, Gerard Cote, Kristen Maitland, Tiening Jin, Junchao Zhou, Paul Gordon, and Cyril Soliman. 2019. “Optical Waveguides for On-Chip Fluorescence Measurements (Conference Presentation).” In Proc.SPIE. Vol. 10885.
Yang, Jinghao, and Pao Tai Lin. 2019. “Real-Time and Non-Destructive Gas Mixture Analysis Using Linear Various Filter Enabled Mid-Infrared Visualization.” Optics Express 27 (19): 26512–22.
Ozcan, Aydogan. “Super-Resolution Microscopy Using Deep Learning.” In SPIE Photonics West, Single Molecule Spectroscopy and Superresolution Imaging. San Francisco, CA.
Ozcan, Aydogan. 2019. “Toward a Thinking Microscope: Deep Learning-Enabled Computational Microscopy and Sensing (Conference Presentation).” In Proc.SPIE. Vol. 11060.
Wang, Yingli, Chen Zhao, Jingjing Wang, Xuan Luo, Lijuan Xie, Shijie Zhan, Jongmin Kim, Xiaozhi Wang, Xiangjiang Liu, and Yibin Ying. 2021. “Wearable Plasmonic-Metasurface Sensor for Noninvasive and Universal Molecular Fingerprint Detection on Biointerfaces.” Science Advances 7 (4): 1–11.

YEAR 1

Gordon, Paul, Rolla Wattinger, Cody Lewis, Vinicius Paula Venancio, Susanne U Mertens-Talcott, and Gerard Coté. 2018. “A Portable Microscopy System for Fluorescence, Polarized, and Brightfield Imaging.” In Proc.SPIE. Vol. 10485.
Ibrahim, B, J McMurray, and a. R Jafari. 2018. “A Wrist-Worn Strap with an Array of Electrodes for Robust Physiological Sensing.” In 2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 4313–17.
Göröcs, Zoltán S, Yair Rivenson, Hatice Ceylan Koydemir, Derek Tseng, Tamara L Troy, Vasiliki Demas, and Aydogan Ozcan. 2018. “Compact Imaging System for Quantitative Fluorescence Sensing through Autofluorescent, Scattering and Absorbing Media (Conference Presentation).” In Proc.SPIE. Vol. 10485.
Ballard, Zachary S, Daniel Shir, Aashish Bhardwaj, Sarah Bazargan, Shyama Sathianathan, and Aydogan Ozcan. 2017. “Computational Sensing in Plasmonics: Design of Low-Cost and Mobile Plasmonic Readers Using Machine Learning.” In Conference on Lasers and Electro-Optics, SM1C.6. OSA Technical Digest (Online). San Jose, California: Optical Society of America.
Ballard, Zachary S, Daniel Shir, Aashish Bhardwaj, Sarah Bazargan, Shyama Sathianathan, and Aydogan Ozcan. 2017. “Computational Sensing Using Low-Cost and Mobile Plasmonic Readers Designed by Machine Learning.” ACS Nano 11 (2): 2266–74.
Rivenson, Yair, Hatice Ceylan Koydemir, Hongda Wang, Zhensong Wei, Zhengshuang Ren, Harun Günaydln, Yibo Zhang, et al. 2018. “Deep Learning Bridges The Gap Between Mobile And Laboratory Grade Microscopes.” In Bmes 2018.
Wang, H, Y Rivenson, Y Jin, Z Wei, R Gao, H Günaydın, L A Bentolila, C Kural, and A Ozcan. 2019. “Deep Learning Enables Cross-Modality Super-Resolution in Fluorescence Microscopy.” Nat. Methods 16 (1): 103.
Rivenson, Yair, Hatice Ceylan Koydemir, Hongda Wang, Zhensong Wei, Zhengshuang Ren, Harun Günaydln, Yibo Zhang, et al. 2018. “Deep Learning Enhanced Mobile-Phone Microscopy.” ACS Photonics 5 (6): 2354–64.
Gorocs, Zoltan, and Aydogan Ozcan. 2018. “Deep Learning Enhances Microscopic Imaging.” In Conference Proceeding.
Wang, Hongda, Yair Rivenson, Hatice Ceylan Koydemir, Zhensong Wei, Zhengshuang Ren, Harun Günaydın, Yibo Zhang, et al. 2018. “Deep Learning Enhances Mobile Microscopy.” In Imaging and Applied Optics 2018 (3D, AO, AIO, COSI, DH, IS, LACSEA, LS&C, MATH, PcAOP), CTH1B.2. OSA Technical Digest. Orlando, Florida: Optical Society of America.
Rivenson, Yair, Hatice Ceylan Koydemir, Hongda Wang, Zhensong Wei, Zhengshuang Ren, Harun Gunaydin, Yibo Zhang, et al. 2018. “Deep Learning Improves Mobile-Phone Microscopy (Conference Presentation).” In Proc.SPIE. Vol. 10772.
Koydemir, Hatice Ceylan, Zoltan Göröcs, Kyle Liang, and Aydogan Ozcan. 2018. “Deep Learning Improves Smartphone Microscopy Using a Convolutional Neural Network.” In Conference Proceeding.
Rivenson, Yair, Zoltán Göröcs, Harun Günaydın, Yibo Zhang, Hongda Wang, and Aydogan Ozcan. 2018. “Deep Learning Microscopy: Enhancing Resolution, Field-of-View and Depth-of-Field of Optical Microscopy Images Using Neural Networks.” In Conference on Lasers and Electro-Optics, AM1J.5. OSA Technical Digest (Online). San Jose, California: Optical Society of America.
Rivenson, Yair, Zoltán Göröcs, Harun Günaydın, Yibo Zhang, Hongda Wang, and Aydogan Ozcan. 2018. “Deep Learning Microscopy: Enhancing Resolution, Field-of-View and Depth-of-Field of Optical Microscopy Images Using Neural Networks.” In Conference on Lasers and Electro-Optics, AM1J.5. OSA Technical Digest (Online). San Jose, California: Optical Society of America.
Zhang, Yibo, Michael Alexander, Sam Yang, Yinxu Bian, Elliot Botvinick, Jonathan R T Lakey, and Aydogan Ozcan. 2018. “High-Throughput Screening of Encapsulated Islets Using Wide-Field Lens-Free On-Chip Imaging.” ACS Photonics 5 (6): 2081–86.
Ozcan, Aydogan. 2018. “Machine Learning and Computation Enabled Microscopy and Sensing for Point-of-Care Medicine and Global Health Title.” In Conference Proceeding.
Ozcan, Aydogan. 2018. “Machine Learning Enabled Computational Imaging and Sensing.” In Conference Proceeding.
Ballard, Zachary, Daniel Shir, Shyama Sathianathan, Sarah Bazargan, Aashish Bhardwaj, and Aydogan Ozcan. 2018. “Machine Learning Enabled Flexible and Low-Cost Plasmonic Sensors for Point-of-Care Sensing (Conference Presentation).” In Proc.SPIE. Vol. 10485.
Ozcan, Aydogan. 2018. “Mobile Microscopy Sensing and Diagnostics through Computational Photonics.” In IEEE.
Ozcan, Aydogan. 2018. “Mobile Microscopy Sensing and Diagnostics through Computational Photonics.” In SPIE.
Ballard, Zachary S, Calvin Brown, and Aydogan Ozcan. 2018. “Mobile Technologies for the Discovery, Analysis, and Engineering of the Global Microbiome.” ACS Nano 12 (4): 3065–82.
Garner, Omai B. 2018. “Multiplex Respiratory Pathogen Molecular Testing at the Point of Care: A Clinical Study.”
Ballard, Zachary S., and Aydogan Ozcan. 2018. “Optimization of Spectral Sensor Performance Using Machine Learning.” In Conference Proceeding.
Nathan, V, and R Jafari. 2018. “Particle Filtering and Sensor Fusion for Robust Heart Rate Monitoring Using Wearable Sensors.” IEEE Journal of Biomedical and Health Informatics 22 (6): 1834–46.
Wei, Qingshan, Guillermo Acuna, Seungkyeum Kim, Carolin Vietz, Derek Tseng, Jongjae Chae, Daniel Shir, Wei Luo, Philip Tinnefeld, and Aydogan Ozcan. 2017. “Plasmonics Enhanced Smartphone Fluorescence Microscopy.” Scientific Reports 7 (1): 1–10.
Wei, Qingshan, Guillermo Acuna, Seungkyeum Kim, Carolin Vietz, Derek Tseng, Jongjae Chae, Daniel Shir, Wei Luo, Philip Tinnefeld, and Aydogan Ozcan. 2018. “Plasmonics Improves the Sensitivity of Smartphone Fluorescence Microscopy.” In Conference on Lasers and Electro-Optics, AM1J.4. OSA Technical Digest (Online). San Jose, California: Optical Society of America.
Gordon, Paul, and Gerard L. Coté. 2018. “Point of Care Biomedical Sensing and Imaging for Underserved Communities.” In Conference Proceeding.
Hernández-Neuta, I, F Neumann, J Brightmeyer, T Ba Tis, N Madaboosi, Q Wei, A Ozcan, and M Nilsson. 2019. “Smartphone-Based Clinical Diagnostics: Towards Democratization of Evidence-Based Health Care.” Journal of Internal Medicine 285 (1): 19–39.
Ceylan Koydemir, Hatice, and Aydogan Ozcan. 2018. “Smartphones Democratize Advanced Biomedical Instruments and Foster Innovation.” Clinical Pharmacology & Therapeutics 104 (1): 38–41.
Ozcan, Aydogan. 2018. “Surface-Enhanced Fluorescence Microscopy on a Smartphone.” In Conference Proceeding.
Rivenson, Yair, and Aydogan Ozcan. 2018. “Toward a Thinking Microscope.” Optics and Photonics News 29 (7): 34–41.
Zhu, Xuena, Mehenur Sarwar, Jun-Jie Zhu, Chengxiao Zhang, Ajeet Kaushik, and Chen-Zhong Li. 2019. “Using a Glucose Meter to Quantitatively Detect Disease Biomarkers through a Universal Nanozyme Integrated Lateral Fluidic Sensing Platform.” Biosensors and Bioelectronics 126: 690–96.
Ballard, Zachary S, Daniel Shir, Aashish Bhardwaj, Sarah Bazargan, Shyama Sathianathan, and Aydogan Ozcan. 2017. “Computational Sensing Using Low-Cost and Mobile Plasmonic Readers Designed by Machine Learning.” ACS Nano 11 (2): 2266–74. ** Also Thrust 3
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