T3 Publications

YEAR 6

• Namkoong, Myeong, Balaji Baskar, Lakhvir Singh, Heng Guo, Justin McMurray, Kimberly Branan, Md Saifur Rahman et al. “Add‐On Soft Electronic Interfaces for Continuous Cuffless Blood Pressure Monitoring.” Advanced Materials Technologies (2023): 2300158.
• Chowdhury, Azmal Huda, Borzooye Jafarizadeh, Nezih Pala, and Chunlei Wang. “Wearable Capacitive Pressure Sensor for Contact and Non-Contact Sensing and Pulse Waveform Monitoring.” Molecules 27, no. 20 (2022): 6872.
• Hasan, Muhammad Mahmudul, Adam Legacy, and Nezih Pala. “Photonic crystal microring resonators for Raman signal enhancement in NIR spectral range.” In Next-Generation Spectroscopic Technologies XV, vol. 12516, pp. 84-92. SPIE, 2023.
• Branan, Kimberly L., Justin P. McMurray, Chin-To Hsiao, and Gerard L. Coté. “Development of a multi-source, multi-detector, finger photoplethysmography system.” In Optical Diagnostics and Sensing XXIII: Toward Point-of-Care Diagnostics, vol. 12387, pp. 36-41. SPIE, 2023.
• Hsiao, Chin-To, Justin P. McMurray, Kimberly L. Branan, and Gerard L. Coté. “Changes in morphology of multiwavelength photoplethysmography across and down major arteries in the forearm.” In Optical Diagnostics and Sensing XXIII: Toward Point-of-Care Diagnostics, vol. 12387, pp. 24-30. SPIE, 2023.
• McMurray, Justin P., Kimberly L. Branan, Chin-To Hsiao, Samuel Idah-Oze, Andres Thrailkill, and Gerard L. Coté. “Multiwavelength photoplethysmography signal analysis as a function of varied wrist contact pressure.” In Optical Diagnostics and Sensing XXIII: Toward Point-of-Care Diagnostics, vol. 12387, pp. 31-35. SPIE, 2023.
• Feng, Brandon Y., Haiyun Guo, Mingyang Xie, Vivek Boominathan, Manoj K. Sharma, Ashok Veeraraghavan, and Christopher A. Metzler. “NeuWS: Neural wavefront shaping for guidestar-free imaging through static and dynamic scattering media.” Science Advances 9, no. 26 (2023): eadg4671.
• Saragadam, Vishwanath, Jasper Tan, Guha Balakrishnan, Richard G. Baraniuk, and Ashok Veeraraghavan. “Miner: Multiscale implicit neural representation.” In European Conference on Computer Vision, pp. 318-333. Cham: Springer Nature Switzerland, 2022.

YEAR 5

• Guo H, Yin Z, Namkoong M, Li Y, Nguyen T, Salcedo E, Arizpe I, Tian L. Printed ultrastable bioplasmonic microarrays for point-of-need biosensing. ACS applied materials & interfaces. 2022 Feb 16;14(8):10729-37.
• Balasubramaniam B, Arun Kumar S, Singh KA, Bhunia S, Verma K, Tian L, Gupta RK, Gaharwar AK. Electrically Conductive MoS2 Reinforced Polyacrylonitrile Nanofibers for Biomedical Applications. Advanced NanoBiomed Research. 2022 Apr;2(4):2100105.
• Kim WS, Hong S, Gamero M, Jeevakumar V, Smithhart CM, Price TJ, Palmiter RD, Campos C, Park SI. Organ-specific, multimodal, wireless optoelectronics for high-throughput phenotyping of peripheral neural pathways. Nature Communications. 2021 Jan 8;12(1):157.
• Branan KL, Reyes GO, Abel JA, Erraguntla M, Gutierrez-Osuna R, Cote GL. Multi-modal physiological sensing on the upper arm. Biophotonics in Exercise Science, Sports Medicine, Health Monitoring Technologies, and Wearables III. 2022 Mar 2;11956:49-54.
• Fine J, McShane MJ, Coté GL. Monte Carlo method for assessment of a multimodal insertable biosensor. Journal of Biomedical Optics. 2022 Aug 1;27(8):083017-.
• Rodriguez AJ, Boonya-Ananta MT, Gonzalez M, Le VN, Fine J, Palacios C, McShane MJ, Coté GL, Ramella-Roman JC. Skin optical properties in the obese and their relation to body mass index: a review. Journal of Biomedical Optics. 2022 Mar 1;27(3):030902-.
• Rodriguez AJ, Alzamora M, Ajmal A, Boonya-Ananta T, Du Le VN, Fredriksson I, Strömberg T, Ramella-Roman JC. In-vivo human study of skin optical properties in individuals with obesity. Optical Diagnostics and Sensing XXII: Toward Point-of-Care Diagnostics. 2022 Mar 2;11968:54-62.
• Bodwell E, Nguyen M, Fine J, Scott K, McShane M, Coté GL. An in vitro testing system for wrist-worn PPG devices. Optical Diagnostics and Sensing XXII: Toward Point-of-Care Diagnostics. 2022 Mar 2;11968:36-42.
• Mogera U, Guo H, Namkoong M, Rahman MS, Nguyen T, Tian L. Wearable plasmonic paper–based microfluidics for continuous sweat analysis. Science Advances. 2022 Mar 23;8(12):eabn1736.

YEAR 4

• Chowdhury, A H, I Khakpour, B Jafarizadeh, N Pala, and C Wang. 2020. “A Facile Fabrication of Porous and Breathable Dielectric Film for Capacitive Pressure Sensor.” In 2020 IEEE SENSORS
• Gonzalez, Mariacarla, Karla Alejandra Montejo, Karl Krupp, Vijaya Srinivas, Edward DeHoog, Purnima Madhivanan, and Jessica C. Ramella-Roman. 2020. “Design and Implementation of a Portable Colposcope Mueller Matrix Polarimeter.” Journal of Biomedical Optics 25 (11): 1–16.
• Li, Yixuan, Heng Guo, Ze Yin, Kendahl Lyle, and Limei Tian. 2021. “Metal–Organic Frameworks for Preserving the Functionality of Plasmonic Nanosensors.” ACS Applied Materials & Interfaces 13 (4): 5564–73.
• Ramella-Roman, Jessica, Amir H. Gandjbakhche, Stephen C. Kanick, Babak Shadgan, and Bruce J. Tromberg. 2021. “Special Section Guest Editorial: Wearable, Implantable, Mobile, and Remote Biomedical Optics and Photonics.” Journal of Biomedical Optics 26 (06): 1–4.
• Boonya-ananta, Tananant, Andres J. Rodriguez, Ajmal Ajmal, Vinh Nguyen Du Le, Anders K. Hansen, Joshua D. Hutcheson, and Jessica C. Ramella-Roman. 2021. “Synthetic Photoplethysmography (PPG) of the Radial Artery through Parallelized Monte Carlo and Its Correlation to Body Mass Index (BMI).” Scientific Reports 11 (1): 1–11. 
• Anis Allagui, Amin Rabiei Baboukani, Ahmed S. Elwakil, Chunlei Wang, Electrochemical stability analysis of red phosphorus-based anode for lithium-ion batteries, Electrochimica Acta, Volume 395, 2021, 139149, ISSN 0013-4686, https://doi.org/10.1016/j.electacta.2021.139149.

• Rodriguez, Andres J, Tananant Boonya-ananta, Akash Kumar Maity, Ashok Veeraraghavan, Rolf B Saager, and Jessica C Ramella-Roman. 2020. “Experimental Integration of a Spatial Frequency Domain Spectroscopy and Pulse Cam System for Quantifying Changes in Skin Optical Properties and Vasculature among Individuals with Obesity.” In SPIE. Vol. 11211. 
• Boominathan, V, J K Adams, J T Robinson, and A Veeraraghavan. 2020. “PhlatCam: Designed Phase-Mask Based Thin Lensless Camera.” IEEE Transactions on Pattern Analysis and Machine Intelligence 42 (7): 1618–29. 
• Boonya-ananta, Tananant, Andres J Rodriguez, Anders K Hansen, Joshua D Hutcheson, and Jessica C Ramella-Roman. 2020. “Modeling of a Photoplethysmographic (PPG) Waveform through Monte Carlo as a Method of Deriving Blood Pressure in Individuals with Obesity.” In SPIE. Vol. 11238. 
• Vashist, Arti, Venkata Atluri, Andrea Raymond, Ajeet Kaushik, Tiyash Parira, Zaohua Huang, Andriy Durygin, et al. 2020. “Development of Multifunctional Biopolymeric Auto-Fluorescent Micro- and Nanogels as a Platform for Biomedical Applications.” Frontiers in Bioengineering and Biotechnology 8 (April): 1–16.
• Saytashev, Ilyas, Sudipta Saha, Joseph Chue-Sang, Pedro Lopez, Megan Laughrey, and Jessica C Ramella-Roman. 2020. “Self Validating Mueller Matrix Micro–Mesoscope (SAMMM) for the Characterization of Biological Media.” Optics Letters 45 (8): 2168–71. 
• Fine, Jesse, Tananant Boonya-ananta, Andres Rodriguez, Jessica C Ramella-Roman, Mike McShane, and Gerard L Cote. 2020. “Parallelized Multi-Layered Monte Carlo Model for Evaluation of a Proximal Phalanx Photoplethysmograph.” In SPIE. Vol. 11247. 
• Yin, Z, H Guo, Y Li, J Chiu, and L Tian. 2020. “Ultrastable Plasmonic Bioink for Printable Point-Of-Care Biosensors.” ACS Appl. Mater. Interfaces 12: 35977.

• Akbari, A, and R Jafari. 2019. “A Deep Learning Assisted Method for Measuring Uncertainty in Activity Recognition with Wearable Sensors.” In 2019 IEEE EMBS International Conference on Biomedical & Health Informatics (BHI), 1–5. .
• Solis, Roger, Arash Pakbin, Ali Akbari, Bobak J. Mortazavi, and Roozbeh Jafari. 2019. “A Human-Centered Wearable Sensing Platform with Intelligent Automated Data Annotation Capabilities.” IoTDI 2019 – Proceedings of the 2019 Internet of Things Design and Implementation, 255–60.
• Akbari, A, and R Jafari. 2019. “An Autoencoder-Based Approach for Recognizing Null Class in Activities of Daily Living In-the-Wild via Wearable Motion Sensors.” In ICASSP 2019 – 2019 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 3392–96.
• Ibrahim, B, and R Jafari. 2018. “Continuous Blood Pressure Monitoring Using Wrist-Worn Bio-Impedance Sensors with Wet Electrodes.” In 2018 IEEE Biomedical Circuits and Systems Conference (BioCAS), 1–4. 
• Ibrahim, B, D Mrugala, and R Jafari. 2019. “Effects of Bio-Impedance Sensor Placement Relative to the Arterial Sites for Capturing Hemodynamic Parameters.” In 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 6569–73. 
• Kim, Woo Seok, Minju Jeong, Sungcheol Hong, Byungkook Lim, and Sung Il Park. 2020. “Fully Implantable Low-Power High Frequency Range Optoelectronic Devices for Dual-Channel Modulation in the Brain.” Sensors (Basel, Switzerland) 20 (13): 3639. 
• McDonough, Daniel J., Xiwen Su, and Zan Gao. 2021. “Health Wearable Devices for Weight and BMI Reduction in Individuals with Overweight/Obesity and Chronic Comorbidities: Systematic Review and Network Meta-Analysis.” British Journal of Sports Medicine 55 (16): 917–25.
• Rodriguez, Andres, Tananant Boonya-ananta, Alex Garrido, Jacob Lopez, and Jessica Ramella-Roman. 2019. “NIRS Measurements of Muscle Oximetry in the Obese  (Conference Presentation).” In SPIE. Vol. 10877. 
• Chue-Sang, Joseph, and Jessica C Ramella-Roman. 2019. “Polarized Light Monte Carlo Simulation of Cervical Collagen Ultrastructure (Conference Presentation).” In SPIE. Vol. 10876.
• Aygun, A, and R Jafari. 2019. “Robust Heart Rate Variability and Interbeat Interval Detection Algorithm in the Presence of Motion Artifacts.” In 2019 IEEE EMBS International Conference on Biomedical & Health Informatics (BHI), 1–5. 
• Kim, Woo Seok, R Liu, Yifeng Cheng, Jiliu Zhou, Jun Wang, and Sung Il Park. 2019. “Soft, Fully Implantable High Frequency Range Optoelectronic Devices for Multichannel Modulation in the Brain.” In 9th International IEEE/EMBS Conference on Neural Engineering.
• Mohammed, Maali Said, Sandra Sendra, Jaime Lloret, and Ignacio Bosch. 2018. “Systems and WBANs for Controlling Obesity.” Journal of Healthcare Engineering 
• Boonya-Ananta, Tananant, Andres Rodriguez, Nicole Sevilla, Suthar Nidhi, Daniel Wilding, and Jessica Ramella-Roman. 2018. “TinyOx – A Wearable Muscle Oximeter for the Obese.” In BMES National Meeting. Atlanta Georgia.
• Akbari, Ali, and Roozbeh Jafari. 2019. “Transferring Activity Recognition Models for New Wearable Sensors with Deep Generative Domain Adaptation.” IPSN 2019 – Proceedings of the 2019 Information Processing in Sensor Networks, 85–96. 
• Boonya-ananta, Tananant, and Jessica Ramella-Roman. 2019. “Voxilization-Based Monte Carlo Simulation of the Ischial Tuberosity (Conference Presentation).” In SPIE. Vol. 10877. 

• Colvin, Lydia E, A Kristen Means, Melissa A Grunlan, and Gerard L Coté. 2018. “A Portable Measuring System for a Competitive Binding Glucose Biosensor.” In SPIE. Vol. 10501. 
• Gorocs, Zoltán, Zachary S. Ballard, Dino Di Carlo, Omai B. Garner, and Aydogan Ozcan. 2018. “Computational Sensing Technologies for Point-of-Care Diagnostics and Global Health.” In Conference Proceeding.
• Lin, Wei-Chiang, Tananant Boonya-ananta, Andres J. Rodriguez, and Jessica C. Ramella-Roman. 2018. “Health Wearable Devices for Patients with Obesity.” In Conference Proceeding.
• Ozcan, Aydogan. 2018. “KRAS Point Mutation Detection and Targeted DNA Sequencing on a Mobile Phone.” In Conference Proceeding.
• Ozcan, Aydogan. 2018. “Machine Learning and Computation Enabled Microscopy and Sensing for Point-of-Care Medicine and Global Health.” In Conference Proceeding.
• Gonzalez, Mariacarla, Ilyas Saytashev, Camila Luna, Brittany Gonzalez, Alejandro Pinero, Manuel Perez, Sharan Ramaswamy, and Jessica Ramella-Roman. 2018. “Multiphoton Microscopy of ECM Proteins in Baboon Aortic Leaflet.” In SPIE. Vol. 10471. 
• Sabharwal, Ashutosh, T Prioleau, and Madhuri M. Vasudevan. 2019. “PixelGrid: Data Visualization for Informed Decision Making in Diabetes Management.” In ACM IMWUT.
• Maity, Akash, Ashok Veeraraghavan, and Ashutosh Sabharwal. 2018. “ShapeCam: Robust Extraction of PPG Shape Using a Camera.” In BMES.
• Mohammed, Maali Said, Sandra Sendra, Jaime Lloret, and Ignacio Bosch. 2018. “Systems and WBANs for Controlling Obesity.” Journal of Healthcare Engineering 
• Sevilla, Nicole, Tananant Boonya-ananta, Andres J. Rodriguez, and Jessica C. Ramella-Roman. 2018. “TinyOx – A Wearable Muscle Oximeter for the Obese.” In Conference Proceeding.